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SRX4485230: Other Sequencing of Sudan ebolavirus
1 ILLUMINA (Illumina MiSeq) run: 76,379 spots, 21.6M bases, 11.1Mb downloads

External Id: ebola_ABEBO2_53412_20150709_SISPA93_Filovirus_XENTERO_RAJENT_nr_trim_BC248_4N
Submitted by: JCVI
Study: Deep sequencing and analysis of filovirus samples
show Abstracthide Abstract
Filoviruses, such as Ebola Virus and Marburg virus, induce hemorrhagic fever (VHF) resulting in high mortality. Both Ebola and Marburg viruses and closely related strains cause severe diseases in humans and nonhuman primates. All the members of Filoviridae are select agents, Risk Group 4 Pathogens (requiring BL4-equvalent containment), and Category A Priority Pathogens. The increased frequency of outbreaks of hemorrhagic fever caused by Ebola and Marburg in central and western Africa and the potential use of such agents as biological weapons underscore the need to have a better understanding of these viruses. As part of this project, we will sequence full genomes of both Ebola and Marburg viruses that will help in understanding the pathogenesis of these viruses to develop effective vaccines and antivirals against it.
Sample:
SAMN04507503 • SRS3609423 • All experiments • All runs
Library:
Name: ebola_ABEBO2_53412_20150709_SISPA93_Filovirus_XENTERO_RAJENT_nr_trim_BC248_4N
Instrument: Illumina MiSeq
Strategy: WGS
Source: VIRAL RNA
Selection: RANDOM PCR
Layout: PAIRED
Runs: 1 run, 76,379 spots, 21.6M bases, 11.1Mb
Run# of Spots# of BasesSizePublished
SRR762107976,37921.6M11.1Mb2018-09-01

ID:
6076179

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